dc.contributor.author | Sahuquillo-Arce, José Miguel | |
dc.contributor.author | Reyes-Prieto, Mariana | |
dc.contributor.author | Hernández-Cabezas, Alicia | |
dc.contributor.author | Molina-Moreno, José Miguel | |
dc.contributor.author | Saez-Nieto, Juan Antonio | |
dc.contributor.author | Marín, María Del Pilar | |
dc.contributor.author | Alcoriza-Balaguer, María Isabel | |
dc.contributor.author | Lahoz, Agustín | |
dc.contributor.author | Sanz, Jaime | |
dc.contributor.author | González-Tarancón, Lola | |
dc.contributor.author | Ferrús, María Loreto | |
dc.contributor.author | Martínez-Priego, Llúcia | |
dc.contributor.author | Magraner-Martínez, Adolfo | |
dc.contributor.author | López-Hontangas, José Luis | |
dc.date.accessioned | 2024-02-09T12:21:01Z | |
dc.date.available | 2024-02-09T12:21:01Z | |
dc.date.issued | 2023-08 | |
dc.identifier.citation | Int J Syst Evol Microbiol. 2023 Aug;73(8). | es_ES |
dc.identifier.uri | http://hdl.handle.net/20.500.12105/17697 | |
dc.description.abstract | Strain HF14-78462T is an environmental bacterium found in clinical samples from an immunocompromized patient in 2014 at Hospital Universitari i Politècnic La Fe (Valencia, Spain). Phenotypically, strain HF14-78462T cells were Gram-stain-negative, aerobic, non-spore forming and non-motile small rods which formed mucous and whitish-translucent colonies when incubated at 20-36 °C. Phylogenetic analyses based on the 16S rRNA genes and the whole genomes of closest sequenced relatives confirmed that strain HF14-78462T is affiliated with the genus Starkeya. The strain was oxidase, catalase and urease positive; but indole, lysine decarboxylase, ornithine decarboxylase and DNase negative, did not produce H2S and was able to utilize a wide variety of carbon sources including acetamide, adonitol, amygdalin, l-arabinose, citric acid, glucose, mannitol and melibiose. Unlike Starkeya novella and Starkeya koreensis, strain HF14-78462T failed to grow in thiosulphate-oxidizing media and had a narrower temperature growth range. Its genome was characterized by a size of 4.83 Mbp and a C+G content of 67.75 mol%. Major fatty acids were C18:1 ω7c, cyclo C19 : 0 and C16 : 0, its polar acids were diphosphatidylglycerol, phosphatidylcholine, phosphatidylethanolamine, phosphatidylglycerol and an aminophospholipid; while the ubiquinones were Q9 (1.8 %) and Q10 (98.2 %). Digital DNA-DNA hybridization values were 41 and 41.4 against S. novella and S. koreensis, respectively, while average nucleotide identity values were around 84 %. Phenotypic, average nucleotide identity and phylogenomic comparative studies suggest that strain HF14-78462T is a new representative of the genus Starkeya and the name Starkeya nomas sp. nov. is proposed. The type strain is HF14-78462T (=CECT 30124T=LMG 31874T). | es_ES |
dc.description.sponsorship | Financial support was obtained by the IIS project 2013/0437. | es_ES |
dc.language.iso | eng | es_ES |
dc.publisher | Microbiology Society | es_ES |
dc.type.hasVersion | VoR | es_ES |
dc.rights.uri | http://creativecommons.org/licenses/by-nc-nd/4.0/ | * |
dc.subject | Emerging pathogens | es_ES |
dc.subject | Immunocompromized patient | es_ES |
dc.subject | Starkeya | es_ES |
dc.subject.mesh | Fatty Acids | es_ES |
dc.subject.mesh | Noma | es_ES |
dc.subject.mesh | Humans | es_ES |
dc.subject.mesh | Phylogeny | es_ES |
dc.subject.mesh | RNA, Ribosomal, 16S | es_ES |
dc.subject.mesh | Sequence Analysis, DNA | es_ES |
dc.subject.mesh | DNA, Bacterial | es_ES |
dc.subject.mesh | Bacterial Typing Techniques | es_ES |
dc.subject.mesh | Base Composition | es_ES |
dc.subject.mesh | Bacteria | es_ES |
dc.title | Starkeya nomas sp. nov., a prosthecate and budding bacterium isolated from an immunocompromized patient | es_ES |
dc.type | research article | es_ES |
dc.rights.license | Attribution-NonCommercial-NoDerivatives 4.0 Internacional | * |
dc.identifier.pubmedID | 37605998 | es_ES |
dc.format.volume | 73 | es_ES |
dc.format.number | 8 | es_ES |
dc.format.page | 005805 | es_ES |
dc.identifier.doi | 10.1099/ijsem.0.005805 | es_ES |
dc.description.peerreviewed | Sí | es_ES |
dc.identifier.e-issn | 1466-5034 | es_ES |
dc.relation.publisherversion | https://doi.org/10.1099/ijsem.0.005805 | es_ES |
dc.identifier.journal | International journal of systematic and evolutionary microbiology | es_ES |
dc.repisalud.centro | ISCIII::Centro Nacional de Microbiología | es_ES |
dc.repisalud.institucion | ISCIII | es_ES |
dc.rights.accessRights | open access | es_ES |